Genes DOWN -
GO Cellular Component Annotations
Used notations:
List Hits - the number of genes
annotated by the considered GO Cellular Component category or annotation cluster within
the analyzed list of target genes
List Total
- the number of genes within the analyzed list of target genes
having at least one GO Cellular Component annotation
Population Hits
- the number of genes, available on the entire microarray, annotated
by the considered GO Cellular Component category or annotation cluster
Population Total - the number of genes available on the
entire microarray and having at least one GO Cellular Component annotation
P-value - the significance p-value of
the gene enrichment of the considered GO Cellular Component category or annotation
cluster, calculated with a unilateral Fisher exact test
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Rank ID Term
List
Hits
List
Total
Population
Hits
Population
Total
P-value Genes ID's Genes Names
1
GO:0005768
endosome
13 664 36 3238 2.16e-02 Rab9 effector protein with kelch motifs epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) vacuolar protein sorting 29 (yeast) phosphatidylinositol 4-kinase, catalytic, beta polypeptide vacuolar protein sorting 35 (yeast) RAB5A, member RAS oncogene family restin (Reed-Steinberg cell-expressed intermediate filament-associated protein) zinc finger, FYVE domain containing 20 syntaxin 7 vesicle-associated membrane protein 4 CD164 molecule, sialomucin RAB9, member RAS oncogene family zinc finger, FYVE domain containing 16
2
GO:0005777
peroxisome
12 664 31 3238 1.50e-02 acyl-CoA synthetase long-chain family member 1 acetyl-Coenzyme A acyltransferase 1 (peroxisomal 3-oxoacyl-Coenzyme A thiolase) 3-hydroxy-3-methylglutaryl-Coenzyme A reductase hydroxysteroid (17-beta) dehydrogenase 4 insulin-degrading enzyme peroxisome biogenesis factor 1 peroxisomal biogenesis factor 12 phytanoyl-CoA 2-hydroxylase ATP-binding cassette, sub-family D (ALD), member 3 sterol carrier protein 2 glyceronephosphate O-acyltransferase peroxisomal biogenesis factor 11B
3
GO:0044427
chromosomal part
12 664 35 3238 4.00e-02 structural maintenance of chromosomes 4 Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans) hypothetical protein DKFZp313A2432 MCM3 minichromosome maintenance deficient 3 (S. cerevisiae) nibrin proliferating cell nuclear antigen replication factor C (activator 1) 1, 145kDa replication factor C (activator 1) 4, 37kDa replication protein A2, 32kDa replication protein A3, 14kDa structural maintenance of chromosomes 1A histone cluster 1, H2ac
4
GO:0005657
replication fork
6 664 11 3238 1.31e-02 MCM3 minichromosome maintenance deficient 3 (S. cerevisiae) proliferating cell nuclear antigen replication factor C (activator 1) 1, 145kDa replication factor C (activator 1) 4, 37kDa replication protein A2, 32kDa replication protein A3, 14kDa
5
GO:0030136
clathrin-coated vesicle
4 664 7 3238 3.62e-02 SNAP-associated protein RAB3A, member RAS oncogene family synaptotagmin I synaptotagmin-like 1
6
GO:0005815
microtubule organizing center
2 664 2 3238 4.2e-02 tubulin, gamma complex associated protein 3 tubulin, gamma 1
7
GO:0030666
endocytic vesicle membrane
2 664 2 3238 4.2e-02 adaptor-related protein complex 2, sigma 1 subunit epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian)
8
GO:0045334
clathrin-coated endocytic vesicle
2 664 2 3238 4.2e-02 adaptor-related protein complex 2, sigma 1 subunit epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian)
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