Genes UP - GO Biological Process Annotations
 
Used notations:
 
  • List Hits - the number of genes annotated by the considered GO Biological Process category or annotation cluster within the analyzed list of target genes
  • List Total - the number of genes within the analyzed list of target genes having at least one GO Biological Process annotation
  • Population Hits - the number of genes, available on the entire microarray, annotated by the considered GO Biological Process category or annotation cluster
  • Population Total - the number of genes available on the entire microarray and having at least one GO Biological Process annotation
  • P-value - the significance p-value of the gene enrichment of the considered GO Biological Process category or annotation cluster, calculated with a unilateral Fisher exact test

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Terms

Rank ID Term

List

Hits

List

Total

Population

Hits

Population

Total

P-value Genes ID's Genes Names
1 GO:0015031 protein transport 38 1174 58 2249 2.64e-02
2 GO:0044267 cellular protein metabolism 37 1174 49 2249 6.22e-04
3 GO:0005975 carbohydrate metabolism 34 1174 50 2249 1.63e-02
4 GO:0006886 intracellular protein transport 26 1174 38 2249 3.07e-02
5 GO:0006396 RNA processing 24 1174 33 2249 1.27e-02
6 GO:0006399 tRNA metabolism 19 1174 24 2249 5.92e-03
7 GO:0006511 ubiquitin-dependent protein catabolism 19 1174 26 2249 2.43e-02
8 GO:0009108 coenzyme biosynthesis 15 1174 20 2249 3.2e-02
9 GO:0043037 translation 15 1174 17 2249 2.01e-03
10 GO:0006119 oxidative phosphorylation 11 1174 14 2249 4.08e-02
11 GO:0043038 amino acid activation 11 1174 13 2249 1.65e-02
12 GO:0046907 intracellular transport 11 1174 14 2249 4.08e-02
13 GO:0009206 purine ribonucleoside triphosphate biosynthesis 9 1174 11 2249 4.45e-02
14 GO:0051789 response to protein stimulus 8 1174 9 2249 2.64e-02
15 GO:0006333 chromatin assembly or disassembly 7 1174 8 2249 4.56e-02
16 GO:0007276 gametogenesis 5 1174 5 2249 3.86e-02
17 GO:0019318 hexose metabolism 5 1174 5 2249 3.86e-02

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This file was produced on Fri Jan 5 12:52:21 2007 with FunCluster 1.03 using GO and KEGG annotations updated on 2006 Nov 03.