Genes UP -
GO Biological Process Annotations
Used notations:
List Hits - the number of genes
annotated by the considered GO Biological Process category or annotation cluster within
the analyzed list of target genes
List Total
- the number of genes within the analyzed list of target genes
having at least one GO Biological Process annotation
Population Hits
- the number of genes, available on the entire microarray, annotated
by the considered GO Biological Process category or annotation cluster
Population Total - the number of genes available on the
entire microarray and having at least one GO Biological Process annotation
P-value - the significance p-value of
the gene enrichment of the considered GO Biological Process category or annotation
cluster, calculated with a unilateral Fisher exact test
..........................................................................................................................
Rank ID Term
List
Hits
List
Total
Population
Hits
Population
Total
P-value Genes ID's Genes Names
1
GO:0007155
cell adhesion
18 252 31 598 4.96e-02 actin related protein 2/3 complex, subunit 1B, 41kDa epithelial V-like antigen 1 macrophage erythroblast attacher collagen, type XII, alpha 1 discoidin, CUB and LCCL domain containing 2 integrin, alpha M (complement component 3 receptor 3 subunit) integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51) integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) integrin, beta 5 laminin, beta 1 contactin 3 (plasmacytoma associated) C-type lectin domain family 4, member A dystonin secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1) ADAM metallopeptidase domain 12 (meltrin alpha) contactin associated protein 1 CD9 molecule
2
GO:0006955
immune response
15 252 24 598 3.28e-02 interferon, gamma-inducible protein 30 cathepsin C cathepsin S Epstein-Barr virus induced gene 2 (lymphocyte-specific G protein-coupled receptor) v-ets erythroblastosis virus E26 oncogene homolog 1 (avian) Fc fragment of IgG, high affinity Ia, receptor (CD64) Fc fragment of IgG, low affinity IIIa, receptor (CD16a) complement factor H major histocompatibility complex, class II, DQ alpha 1 HLA-G histocompatibility antigen, class I, G interleukin 15 lipopolysaccharide binding protein lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa) C-type lectin domain family 4, member A CD163 molecule
3
GO:0007166
cell surface receptor linked signal transduction
15 252 21 598 5.64e-03 colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage) annexin A1 interleukin 1 receptor, type I integrin, alpha M (complement component 3 receptor 3 subunit) integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51) integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) integrin, beta 5 C-type lectin domain family 4, member A anterior pharynx defective 1 homolog A (C. elegans) delta-like 4 (Drosophila) protein tyrosine phosphatase, receptor type, C dystonin ADAM metallopeptidase domain 12 (meltrin alpha) CD247 molecule
4
GO:0006950
response to stress
9 252 12 598 2.12e-02 protein disulfide isomerase family A, member 5 mitogen-activated protein kinase kinase kinase kinase 5 serum/glucocorticoid regulated kinase family, member 3 hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) DnaJ (Hsp40) homolog, subfamily A, member 1 heat shock 70kDa protein 8 cisplatin resistance-associated overexpressed protein serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) mitogen-activated protein kinase kinase kinase kinase 4
5
GO:0016064
immunoglobulin mediated immune response
4 252 4 598 3.11e-02 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) C-type lectin domain family 4, member A chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated) CD53 molecule
6
GO:0019730
antimicrobial humoral response
4 252 4 598 3.11e-02 integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) C-type lectin domain family 4, member A chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated) CD53 molecule
..........................................................................................................................